App Settings¶
Settings Defaults¶
| ID | Label | Type | Required | Prefix | Default |
|---|---|---|---|---|---|
| num_gap_extensions | maximum number of gap extensions | int | No | -e | 0 |
| maximum_number_of_gap_opens | maximum number or fraction of gap opens | int | No | -o | 0 |
| vcf | Output as VCF file | boolean | No | –vcf | TRUE |
| html | HTML | boolean | No | –html | TRUE |
| filter_common | Filter common | boolean | No | TRUE | |
| minimum_score | enum | No | -s | 500 | |
| label_run_name | string | No | -l | ||
| bool_single_end_reads_used | bool | int | No | -e | 1 |
| peptide_length | peptide_length | int | No | 9 | |
| kmer_peptide_length | kmer peptide length | int | No | 17 |